shotpeen,
Welcome to the cover... relax you are in good hands here.
You sound like you are wanting to make some changes to make the IA program more functional and logical. There are a lot of good suggestions here. Take one or two at a time and try to slowly change your system.
I am pretty much in the same situation as you: CB auditors 'do not like, but accept' our IAs as clause-based vs. process-based, I have no "quality" degree, I am a 'black-and-white' type person, keep butting heads with Top Management that ISO is more than just "pass the audit, keep certificate on the wall", etc. I have been auditing in various organizations previously and I keep getting accused of going "outside the scope" (yes, "training records" are a part of the of "welding" process)! I am sure that many here at the Cove, at one time or another, could relate to more than one these.
Yes, you can combine the systems as well as the audits for similar processes. Why do you need to audit the 'Internal Audit process' three times? IA is pretty much the same. I have a schedule for my 9001 audits and another for my 14001, but they use the same procedure. IA, (and a few other processes), gets covered as a combined-system audit. Unfortunately, management has not allowed me to combine our two systems... yet. But it will happen in the next few years when they will have to be revised anyway (QM: "processes will will be numbered to match the ISO clause").
A few things I have found helpful:
- If you are the process owner of Internal Audits, re-write the procedure so it covers all your systems, is logical, keep it short, and, where possible, general. Originally, my 9001 and 14001 IA processes were vastly different, I now have one procedure for IA.
- One recommendation I got from one of my CB auditors was to 'trade IA services with other companies in my area'. Just like John recommended, I am currently trying to work with my local ASQ chapter (closest two are about 200 miles away and I am right on the border of both) to see who I might be able to work with.
- Pick you battles and use the ISO document(s) and audit NCs to support your modifications. On more than one occasion, my "recommendation" has been shot down by management, then the CB auditor finds it and writes the NC (no, I did not tell nor guide the auditor to find it, either)... I think I bloodied my lip trying to keep from uttering "I told you so!")

- Make up process (turtle) diagrams for your processes. My 9001 auditors are currently doing "checklist audits", (no, I can't change them, top-management won't allow it). I need to get them to adjust and open their thinking to process-based. They are going to have to when the 2015 version is issued and their checklists will not be carried to the new system.
drgnrider